Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015846493.1_cds_XP_016509679.1_22590
CDS Infomation

[gene=LOC107827118] [db_xref=GeneID:107827118] [protein=protein SUPPRESSOR OF GENE SILENCING 3-like isoform X3] [protein_id=XP_016509679.1] [location=complement(join(105408..105491,105579..105737,105883..106125,107762..109630))] [gbkey=CDS]
Sequence

ATGAGTTCCAGCAAAAGGGTTGGGAAGTCTTCTAATTCATCAGGAAAGCAGAAAGCTATA
TGCGAAACAACTACTACACCAACGGTTGATGATATAAATGTAGGCGTAGAAGATATGGGG
TTGAACTCCGATCAAAATGATGGATGGATAGTGTGTTCTAGAAAGTCCAAGAACAAGGGT
GGAAGCAGCAGTGCTGGAATGAAGCAATGGATTTCTCAGAATCCCACTCCAAAAGCCAAA
CTGGGAATGCGTAACAATATTGTTGGATCATCAGGACAGGGGTCTAGGAATAACTGGTCC
ACACCTAATTATCATCCTCGAAAACCTGCTGGCAGAGAATGCTACACACCGACACCCGCT
GCAGTTCCTCCTGCCCTGAAGAATGGTTGGGATTGGTCATCTGTCGCTCGTTCCAATGAG
GACCATGATACTTATTCCCCTGTCGCTGATGTCAAGGCTTCCTGTGAACATGATGGAGAG
GATAATGAATCGGATTTGCCTGATGATGACAGTGATGATGAGCTTCCGAGTGATGACGAC
TTTGATGATCACTCGGATGTAAATGAAATGAGTCATGAGGTACTCAAGGAAAGTCGTTGG
TTCAAGAACCTTTTCAAATGTCTTGACAGTTTGACTGTCACTGAGATTAATGATCCGGAA
AGACAGTGGCACTGCCCTGCATGCAAAGGTGGTCCGGGTGCAATTGAGTGGTTTCCAGGG
ATACAGTCAGTGATGAACCACGCAAAAACGAAAGGATTTAGGATGAAATTACACAGACAA
CTTGCTCAACTTTTGGAGGAAGAGCTGCGTCGGAGGGGAACTTCTGTTGTACCTCCAGGT
CAAGTGTATGGAAGATGGGGTGGCGGTGAATATGAAGATAAGGAAATAGTGTGGCCACCG
ACCGCGATTATCGTGAACACAGTGCTTGAGAAAGATGAAAATGACAAGTGGATTGGAATG
GGAAATCAGGAGCTGCGTGATTATTTCAGCTCTTATGCTGCTGTCAAGGCAGCGCGAAGC
TCATATGGTCCACAAGGCCATCGTGGTATCAGTGTGTTGATTTTTGAGGCCACTCCCGTG
GGATACATGGAGGCTGTACTTCTCAGTGAGCAGTTTTCTGAAAAAGGAAGTGATAGAGAT
GCATGGGAACACAATCCAGTTCTCTTTTATCCTGGGGGAAAACGTAAGCTTTATGGTTAC
ATGGCAGAGAAAAGAGACATGGACAACTTTAACCGGCATTCACATGGGAAATCAAGGCTG
AAGTTCGAGATGAGGTCATATAAAGAAACTGTTTCGAATCCAGCGATGCAGATGTCGGAG
GATAATCAACAGCTCATATGGTTCAAGAACCAAGCCTCTAAGCACCAAAAGCGGGCTAAA
GCTACTGAAGAGTCTCTAAGACTGGTGAGTGAAAAGCACCGTCAGACAGTCGAAGAGAAC
AAGATTGTCAGACTGAGAACTAAGATGCACCATGAACGGAACAAGGAAGAGATGGAATAT
CTAGAGCAGTTTTTTAATGATCAGTTGAAAATGATTTATGATGCCAGGACTGCTGAGGAG
GACAAGTTTGAAAAGATACAGCAGGAACAGCGTGAGATGATCTATCAATCTAATGCAACT
ATTTCCTCGGCTGAGGATCATCGACTCAGGGCAGAGAAAGTTGCGAAATTTATCAAACTT
CAGGACAAGGATATGGAAGAATTTGTGGAAGAGAGGGATAATCTGATAAGAGCTCATGAA
GATAGGGTAGGTTCAATGAGACGCAAATACTTGCTGCAATACTCGGAAGAGGCAGTTGCA
CTTGAGAAGAATTTTGATCTCGAACTGGCTAAGCTGATGGAGAAGTACTCATCAAAGCAA
TCTGAGCAGGATCTTATTGTCGATCAGTCTAATATGATGCCTCCTACGGGTAATCTCAAG
AGGTTGTTTATCAAGGACGATGAGAAATTCAAATCAATCTCCTTAGAGAATGCTTCTAAC
TTGTCTGAACTTTCTGTTTCATTGGAGAGAGTTGTAACAGGCAGGGAAGGCAAACCTGTT
TCTGATTTGGTTACATTTGTGGGTACCCTGTCTAAAGTCAAAATACTTCCTCTTAATGGC
ATGTTTCCGCAGCTCCTAGATGAAGCTCCTGTTCTGCCAATGTTATTGCCATCGTCATAC
TCTCTAAAGATTCTTGAACTCAAAGGTGTGAACTTTATGGACTTTAATCAAATATCTGTA
GTTGTCCTCCTACTTGCAAGTGCTCCCAACTTGCAAGAACTCTATGTAGAGGCTTCTACA
ATCGAGCGCGCTAAACCAGGAACAAGTCTCGGGTTATCTAAAATGCTTGGACTGCTGCAC
AACTTTTCCCCTTAG

Peptide Sequence

PEP ID

XP_016509679.1
PEP Infomation

PREDICTED: protein SUPPRESSOR OF GENE SILENCING 3-like isoform X3 [Nicotiana tabacum]
Sequence

MSSSKRVGKSSNSSGKQKAICETTTTPTVDDINVGVEDMGLNSDQNDGWIVCSRKSKNKG
GSSSAGMKQWISQNPTPKAKLGMRNNIVGSSGQGSRNNWSTPNYHPRKPAGRECYTPTPA
AVPPALKNGWDWSSVARSNEDHDTYSPVADVKASCEHDGEDNESDLPDDDSDDELPSDDD
FDDHSDVNEMSHEVLKESRWFKNLFKCLDSLTVTEINDPERQWHCPACKGGPGAIEWFPG
IQSVMNHAKTKGFRMKLHRQLAQLLEEELRRRGTSVVPPGQVYGRWGGGEYEDKEIVWPP
TAIIVNTVLEKDENDKWIGMGNQELRDYFSSYAAVKAARSSYGPQGHRGISVLIFEATPV
GYMEAVLLSEQFSEKGSDRDAWEHNPVLFYPGGKRKLYGYMAEKRDMDNFNRHSHGKSRL
KFEMRSYKETVSNPAMQMSEDNQQLIWFKNQASKHQKRAKATEESLRLVSEKHRQTVEEN
KIVRLRTKMHHERNKEEMEYLEQFFNDQLKMIYDARTAEEDKFEKIQQEQREMIYQSNAT
ISSAEDHRLRAEKVAKFIKLQDKDMEEFVEERDNLIRAHEDRVGSMRRKYLLQYSEEAVA
LEKNFDLELAKLMEKYSSKQSEQDLIVDQSNMMPPTGNLKRLFIKDDEKFKSISLENASN
LSELSVSLERVVTGREGKPVSDLVTFVGTLSKVKILPLNGMFPQLLDEAPVLPMLLPSSY
SLKILELKGVNFMDFNQISVVVLLLASAPNLQELYVEASTIERAKPGTSLGLSKMLGLLH
NFSP

Transcript Sequence

Gene sequence data has not been registered.